Skip to content

Code related to the research project "Simulation of periodic contact patterns on the effect of contact tracing". Aka, my master's thesis.

License

Notifications You must be signed in to change notification settings

daniagudelos/contact_tracing

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

80 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

Contact tracing and periodic contact patterns

Contact tracing is a mechanism for the control of outbreaks. It aims to break transmission chains by tracing and isolating people exposed to an infectious individual. In this research work, we investigate how the performance of contact tracing is affected by periodic contact patterns, which are present in events that favor the propagation of diseases and events that aim to control them.

To answer the research question, we constructed a mathematical model that incorporates periodicity for each type of contact tracing: backward - which identifies the infectors, forward - which identifies the infectees, and full - which identifies both. The models incorporate the non-recursive and recursive variants of contact tracing. In the non-recursive variant, the process stops after the contacts of one case are identified, whereas the recursive variant follows a chain of infections.

We reformulate the question as a set of optimization problems and solve it for the nonrecursive backward contact tracing scenario. Our results indicate that periodic contact rates positively affect the effectiveness of backward contact tracing. The existence of periodicity increases the probability of extinction of the epidemic and minimizes the effective reproduction number. The models and optimization problems we propose here can be employed in future research to explore more complex scenarios and other types of contact tracing.


NOTE

This is a fragment of my master thesis. Suggested citation:

Agudelo, S. (2021) Simulation of periodic contact patterns on the effect of contact tracing (Master's Thesis, Technical University of Munich, Munich, Germany).


About

Code related to the research project "Simulation of periodic contact patterns on the effect of contact tracing". Aka, my master's thesis.

Topics

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages