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@chopdgd

Clinical Bioinformatics Group Children's Hospital of Philadelphia

Bioinformatics projects at CHOP's Division of Genomic Diagnostics

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  1. cookiecutter-django-reactjs cookiecutter-django-reactjs Public

    Forked from cookiecutter/cookiecutter-django

    Cookiecutter Django is a framework for jumpstarting production-ready Django and ReactJS projects quickly.

    Python 91 15

  2. django-genome django-genome Public

    Django app for dealing with Human Genome Reference data and keeping it up to date. Syncs data from HGNC and UCSC (RefSeq, etc)

    Python 9

  3. django-phenotype-ontologies django-phenotype-ontologies Public

    Django app for parsing/loading Phenotype ontologies (HPO, MONDO, OncoTree, etc)

    Python 6

  4. bfx-tools-wdl bfx-tools-wdl Public

    WDL tasks for commonly used BFX tools

    WDL 6 5

  5. django-genomix django-genomix Public

    Core library for Nexus django projects. Common utils needed across many apps

    Python 3

  6. somatic_variant_classification somatic_variant_classification Public

    Machine learning classifier to distinguish sequencing artifacts from true SNVs in pediatric cancers

    Python 3

Repositories

Showing 10 of 17 repositories
  • nexus-reqs Public

    Requirement Files for Nexus

    chopdgd/nexus-reqs’s past year of commit activity
    0 0 0 65 Updated Jun 27, 2024
  • django-phenotype-ontologies Public

    Django app for parsing/loading Phenotype ontologies (HPO, MONDO, OncoTree, etc)

    chopdgd/django-phenotype-ontologies’s past year of commit activity
    Python 6 MIT 0 1 38 Updated Jun 26, 2024
  • django-genomix Public

    Core library for Nexus django projects. Common utils needed across many apps

    chopdgd/django-genomix’s past year of commit activity
    Python 3 MIT 0 1 38 Updated Jun 26, 2024
  • django-genome Public

    Django app for dealing with Human Genome Reference data and keeping it up to date. Syncs data from HGNC and UCSC (RefSeq, etc)

    chopdgd/django-genome’s past year of commit activity
    Python 9 MIT 0 1 40 Updated Jun 26, 2024
  • django-user-activities Public

    Django app for dealing with User activities (likes, tags, comments, etc.)

    chopdgd/django-user-activities’s past year of commit activity
    Python 1 MIT 0 1 38 Updated Jun 26, 2024
  • cookiecutter-django-reactjs Public Forked from cookiecutter/cookiecutter-django

    Cookiecutter Django is a framework for jumpstarting production-ready Django and ReactJS projects quickly.

    chopdgd/cookiecutter-django-reactjs’s past year of commit activity
    Python 91 BSD-3-Clause 2,851 2 36 Updated Jun 18, 2024
  • bfx-tools-wdl Public

    WDL tasks for commonly used BFX tools

    chopdgd/bfx-tools-wdl’s past year of commit activity
    WDL 6 5 6 0 Updated Nov 30, 2023
  • somatic_variant_classification Public

    Machine learning classifier to distinguish sequencing artifacts from true SNVs in pediatric cancers

    chopdgd/somatic_variant_classification’s past year of commit activity
    Python 3 MIT 0 0 2 Updated Jul 6, 2023
  • react-genomix Public

    Core library for Nexus projects using ReactJS

    chopdgd/react-genomix’s past year of commit activity
    JavaScript 1 MIT 1 1 20 Updated Oct 7, 2022
  • django-netezza Public Forked from msabramo/django-netezza

    Django Netezza backend using pyodbc

    chopdgd/django-netezza’s past year of commit activity
    Python 0 6 0 0 Updated Nov 19, 2019

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