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@cbib

Centre de Bioinformatique de Bordeaux

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  1. DeepSpot DeepSpot Public

    DeepSpot is a deep learning method for the enhancement of mRNA fluorescent spots in microscopy images

    Python 14 3

  2. MIX MIX Public

    MIX: Combining multiple assemblies from NGS data

    Python 12 7

  3. MICADo MICADo Public

    Looking for mutations in PacBio cancer data: an alignment-free method

    Python 8 2

  4. SalienceNet SalienceNet Public

    Forked from EdgarLefevre/SalienceNet

    Python 8

  5. virhunter virhunter Public

    Deep Learning method for novel virus detection in sequencing data

    Python 6

  6. DIMet DIMet Public

    Differential analysis of targeted Isotope-labeled Metabolomics data

    Python 3 2

Repositories

Showing 10 of 16 repositories
  • ProteomX Public

    Statistical and Functional analysis and interpretation of proteomics data

    cbib/ProteomX’s past year of commit activity
    Python 0 MIT 1 28 3 Updated Jun 17, 2024
  • TrialMatchAI Public

    TrialMatchAI aims to seamlessly match cancer patients to clinical trials based on their unique genomic and clinical profiles using AI

    cbib/TrialMatchAI’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 13, 2024
  • TempAI Public
    cbib/TempAI’s past year of commit activity
    Python 0 0 0 0 Updated Jun 13, 2024
  • TraceGroomer Public

    Format and normalise tracer metabolomics given file(s), to produce the .csv files which are ready for DIMet analysis.

    cbib/TraceGroomer’s past year of commit activity
    Python 1 MIT 1 0 0 Updated May 9, 2024
  • DIMet Public

    Differential analysis of targeted Isotope-labeled Metabolomics data

    cbib/DIMet’s past year of commit activity
    Python 3 MIT 2 0 0 Updated May 9, 2024
  • dypfish Public

    Python library for statistical analysis of mRNA and protein distributions in fluorescent microscopy images

    cbib/dypfish’s past year of commit activity
    Python 1 1 8 5 Updated Oct 3, 2023
  • cbib/SalienceNet’s past year of commit activity
    Python 8 MIT 1 0 0 Updated Jul 31, 2023
  • linda Public

    Web application for managing experimental and environmental metadata for plant experiments

    cbib/linda’s past year of commit activity
    TypeScript 2 MIT 0 13 19 Updated Jul 19, 2023
  • tflex Public
    cbib/tflex’s past year of commit activity
    R 0 0 0 0 Updated May 10, 2023
  • virhunter Public

    Deep Learning method for novel virus detection in sequencing data

    cbib/virhunter’s past year of commit activity
    Python 6 0 0 0 Updated Apr 25, 2023

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