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  1. MOFA2 MOFA2 Public

    Multi-Omics Factor Analysis

    R 283 49

  2. MOFA MOFA Public

    Multi-Omics Factor Analysis

    R 228 55

  3. mofapy2 mofapy2 Public

    Multi-omics factor analysis v2

    Python 33 26

  4. slalom slalom Public

    Jupyter Notebook 28 10

  5. mofax mofax Public

    Work with trained factor models in Python

    Jupyter Notebook 22 9

  6. FISHFactor FISHFactor Public

    A probabilistic factor model for spatial transcriptomics data with subcellular resolution

    Jupyter Notebook 20

Repositories

Showing 10 of 13 repositories
  • MOFA2 Public

    Multi-Omics Factor Analysis

    bioFAM/MOFA2’s past year of commit activity
    R 283 LGPL-3.0 49 59 2 Updated Jun 12, 2024
  • mofapy2 Public

    Multi-omics factor analysis v2

    bioFAM/mofapy2’s past year of commit activity
    Python 33 LGPL-3.0 26 6 2 Updated Apr 13, 2024
  • mofax Public

    Work with trained factor models in Python

    bioFAM/mofax’s past year of commit activity
    Jupyter Notebook 22 MIT 9 8 5 Updated Jan 23, 2024
  • cellij Public

    Implementation of a Modular Multi-Omics Factor Model Framework

    bioFAM/cellij’s past year of commit activity
    Python 3 BSD-3-Clause 0 13 3 Updated Oct 19, 2023
  • cellij-notebooks Public
    bioFAM/cellij-notebooks’s past year of commit activity
    Jupyter Notebook 2 BSD-3-Clause 0 0 0 Updated Sep 15, 2023
  • MOFAdata Public

    Data for Multi-Omics Factor Analysis (MOFA)

    bioFAM/MOFAdata’s past year of commit activity
    R 2 2 1 0 Updated Jun 9, 2023
  • FISHFactor Public

    A probabilistic factor model for spatial transcriptomics data with subcellular resolution

    bioFAM/FISHFactor’s past year of commit activity
    Jupyter Notebook 20 LGPL-3.0 0 0 0 Updated May 3, 2023
  • MOFA2_tutorials Public

    MOFA2 Tutorials

    bioFAM/MOFA2_tutorials’s past year of commit activity
    HTML 4 9 1 1 Updated Feb 8, 2023
  • slalom Public
    bioFAM/slalom’s past year of commit activity
    Jupyter Notebook 28 Apache-2.0 10 6 1 Updated Feb 1, 2023
  • MEFISTO_analyses Public

    Repository containing the code to reproduce the analyses contained in the MEFISTO manuscript

    bioFAM/MEFISTO_analyses’s past year of commit activity
    R 7 2 0 0 Updated Jul 27, 2021
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