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@PeptoneLtd

Peptone

World's first, end-to-end Protein Engineering Operating System (PeOS).

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  1. dspp-keras dspp-keras Public

    Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning applications.

    Python 166 21

  2. ADOPT ADOPT Public

    ADOPT: intrinsic protein disorder prediction through deep bidirectional transformers

    Jupyter Notebook 15 1

  3. proteinmpnn_ddg proteinmpnn_ddg Public

    Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.

    Python 13 1

  4. nerfax nerfax Public

    An efficient method for the conversion from internal to Cartesian coordinates that utilizes the platform-agnostic JAX Python library.

    Jupyter Notebook 12 3

  5. Machine-learning-for-proteins Machine-learning-for-proteins Public

    Forked from yangkky/Machine-learning-for-proteins

    Listing of papers about machine learning for proteins.

    8 3

  6. ProteoNeMo ProteoNeMo Public

    Ongoing research training transformer models on proteome at scale

    Python 5 1

Repositories

Showing 10 of 10 repositories
  • proteinmpnn_ddg Public

    Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.

    PeptoneLtd/proteinmpnn_ddg’s past year of commit activity
    Python 13 MIT 1 0 0 Updated Jun 28, 2024
  • ColabDesign Public Forked from sokrypton/ColabDesign

    Making Protein Design accessible to all via Google Colab!

    PeptoneLtd/ColabDesign’s past year of commit activity
    Python 0 118 0 0 Updated Jun 19, 2024
  • contrastive-finetuning-plms Public

    Optimizing protein language models with Sentence Transformers

    PeptoneLtd/contrastive-finetuning-plms’s past year of commit activity
    Python 3 Apache-2.0 1 0 0 Updated Jun 18, 2024
  • nerfax Public

    An efficient method for the conversion from internal to Cartesian coordinates that utilizes the platform-agnostic JAX Python library.

    PeptoneLtd/nerfax’s past year of commit activity
    Jupyter Notebook 12 Apache-2.0 3 0 0 Updated Jun 12, 2024
  • ADOPT Public

    ADOPT: intrinsic protein disorder prediction through deep bidirectional transformers

    PeptoneLtd/ADOPT’s past year of commit activity
    Jupyter Notebook 15 MIT 1 12 0 Updated May 2, 2023
  • pepkalc Public

    Robust simulation software for the comprehensive evaluation of protein electrostatics in unfolded state.

    PeptoneLtd/pepkalc’s past year of commit activity
    Python 4 1 0 0 Updated Aug 23, 2022
  • ProteoNeMo Public

    Ongoing research training transformer models on proteome at scale

    PeptoneLtd/ProteoNeMo’s past year of commit activity
    Python 5 Apache-2.0 1 3 0 Updated Aug 11, 2022
  • dspp-keras Public

    Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning applications.

    PeptoneLtd/dspp-keras’s past year of commit activity
    Python 166 AGPL-3.0 21 1 0 Updated Jun 15, 2022
  • Machine-learning-for-proteins Public Forked from yangkky/Machine-learning-for-proteins

    Listing of papers about machine learning for proteins.

    PeptoneLtd/Machine-learning-for-proteins’s past year of commit activity
    8 GPL-3.0 195 0 0 Updated Mar 15, 2021
  • dspp-data Public

    Database of Structural Propensities of Proteins (dSPP) raw data repository by Peptone Inc.

    PeptoneLtd/dspp-data’s past year of commit activity
    4 2 1 0 Updated Jun 4, 2017

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