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@GENCARDIO

UDMMP - Unitat de Diagnòstic Molecular i Medicina Personalitzada

UDMMP Bioinformatics Repository

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  1. PhiXer PhiXer Public

    Perl

  2. simple_bam_snap simple_bam_snap Public

    Simple BAM snapshots

    Python

  3. build_gene_transcript_db build_gene_transcript_db Public

    Get the latest gene-transcript identifiers using Ensembl, RefSeq, MANE and LRGs models.

    Python

  4. rna_seq_pipeline rna_seq_pipeline Public

    Basic RNA-seq pipeline that covers fastq preprocessing, alignment and quantification.

    Python

  5. catsalut_tiers catsalut_tiers Public

    Python

  6. eval_somatic_control eval_somatic_control Public

    Evaluate the expected detected variants from a commercial reference standard

    Python

Repositories

Showing 8 of 8 repositories
  • lots Public
    GENCARDIO/lots’s past year of commit activity
    HTML 0 0 4 0 Updated Jun 4, 2024
  • GENCARDIO/fitxes_tecniques’s past year of commit activity
    HTML 0 0 0 0 Updated Oct 18, 2023
  • build_gene_transcript_db Public

    Get the latest gene-transcript identifiers using Ensembl, RefSeq, MANE and LRGs models.

    GENCARDIO/build_gene_transcript_db’s past year of commit activity
    Python 0 0 1 0 Updated Oct 4, 2023
  • eval_somatic_control Public

    Evaluate the expected detected variants from a commercial reference standard

    GENCARDIO/eval_somatic_control’s past year of commit activity
    Python 0 0 0 0 Updated Apr 26, 2023
  • GENCARDIO/catsalut_tiers’s past year of commit activity
    Python 0 0 0 0 Updated Mar 21, 2023
  • rna_seq_pipeline Public

    Basic RNA-seq pipeline that covers fastq preprocessing, alignment and quantification.

    GENCARDIO/rna_seq_pipeline’s past year of commit activity
    Python 0 0 0 0 Updated Apr 4, 2022
  • simple_bam_snap Public

    Simple BAM snapshots

    GENCARDIO/simple_bam_snap’s past year of commit activity
    Python 0 0 0 0 Updated Mar 10, 2022
  • PhiXer Public
    GENCARDIO/PhiXer’s past year of commit activity
    Perl 0 0 0 0 Updated Oct 18, 2021

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