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Intelligent Data Processing and Applications course project where the objective is to implement a RNA sequences differencing (edit distance) and patching tool, which can be applied on different kinds of RNA sequence formats (such as FASTQ, EMBL, FASTA, GCG, etc.).
RNA Sequence differencing utilizes Tree edit distance algorithms and Information retrieval algorithms to compute similarities
and integrate them in a search system.
Requirements
pip install -r requirements.txt
Usage
Open run.bat and select the desired mode.
About
Intelligent Data Processing and Applications course project where the objective is to implement a RNA sequences differencing (edit distance) and patching tool, which can be applied on different kinds of RNA sequence formats (such as FASTQ, EMBL, FASTA, GCG, etc.).