This script allows us to generate ORF for a given Protein Sequence.
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Updated
May 2, 2017 - Python
This script allows us to generate ORF for a given Protein Sequence.
Search for new PDB structures corresponding to a search term and deposited after a certain date.
Simple awk script to transfer properties indexed by amino acid type to a Bfactor column of the pdb file.
This script aims at reading a given PDB file and generation dihedral angles from it.
Python script to correct misformated x, y, and z coordinates output by Q Chem simulations.
A PDB Viewer Application implemented completely in JavaFX
Data Analysis of MD Simulation
Visualization of proteins directly from the PDB database or from a .pdb file.
defines the interface region of a protein complex making possible to calculate the i_rmsd between native and predicted structures following the CAPRI criteria
Scripts to aid protein design. Mostly parsing PDBs, fasta files, and score files.
A console application for the ration calculation of amino acids from a PDB file.
A console application for the estimation of the primary and secondary structure's elements. Input should be the FASTA-formatted "ss.txt" file generated by PDB database.
Standalone program to download PDB Symbol files for debugging without WDK
Python implementation of the Ramachandran plot
Python program that can identify the residues interacting between chains of a complex protein.
3D vizualisation of pdb files with python
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