wrapper for multiple linkml storage engines (alpha software)
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Updated
Jun 26, 2024 - Python
wrapper for multiple linkml storage engines (alpha software)
National Microbiome Data Collaborative (NMDC) unified data model
Schema repository for the Alliance of Genome Resources persistent data store
LLM-based ontological extraction tools, including SPIRES
Linked Open Data Modeling Language
Python toolkit for SSSOM mapping format
Link Modeling Language (LinkML) model
A standardized browser-based spreadsheet editor and validator that can be run offline and locally, and which includes templates for SARS-CoV-2 and Monkeypox sampling data. This project, created by the Centre for Infectious Disease Genomics and One Health (CIDGOH), at Simon Fraser University, is now an open-source collaboration with contributions…
Metadata schemes implemented in LinkML for the DZIF microbial OMICs database plus building scripts for the DZIF DataHarmonizer.
Simple Standard for Sharing Ontology Mappings
Schema and generated objects for biolink data model and upper ontology
Data transformation framework for LinkML data models
Runtime support for linkml generated models
LinkML model for handle-based PIDs for resources in catalysis (PID4Cat)
Data ingest application for Monarch Initiative knowledge graph using Koza
SQL and SQLite builds of OWL ontologies
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