Cancer Predisposition Sequencing Reporter (CPSR)
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Updated
Jun 26, 2024 - R
Cancer Predisposition Sequencing Reporter (CPSR)
A comprehensive classification tool based on pure transcriptomics for precision medicine
PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch. Thanks!
Chaste - Cancer Heart And Soft Tissue Environment - main public repository.
Crossmapped phenotype ontologies for the oncology domain
DeepResponse: Large Scale Prediction of Cancer Cell Line Drug Response with Deep Learning Based Pharmacogenomic Modelling
Detecting various characteristics of glioblastoma using Deep Learning
Contains code related to my multi-omics integration project at WEHI.
Code to accompany the paper: ”ProteinNetworkSight efficiently transforms co-expressed protein lists into interactive networks and offers suggestions for their modifications”
Postdoctoral Fellow at Harvard Medical School
Human gene annotations for the oncology domain
📎 About MIMBCD-UI Project
DeepResponse: Large Scale Prediction of Cancer Cell Line Drug Response with Deep Learning Based Pharmacogenomic Modelling
🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html
Functions and data relevant to the tutorials published on the WeChat official account MedBioInfoCloud are encapsulated in this R package.
Bioconductor R-package: Curated Prostate Cancer Data
An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
Add a description, image, and links to the cancer-research topic page so that developers can more easily learn about it.
To associate your repository with the cancer-research topic, visit your repo's landing page and select "manage topics."